Purpose and Benefits
This tab captures Bacteriology test results for the patient, which differ from laboratory tests. Bacteriology test results include smear test results, culture test results and drug-sensitivity test results.
Bacteriology Tab
Steps
Configure the tab (Bacteriology)
Below is the sample code snippet to configure the tab under clinical consultation. Add the configuration under clinical/extension.json.
| Code Block | ||||
|---|---|---|---|---|
| ||||
"bahmniClinicalConsultationBacteriology": {
"id": "bahmni.clinical.consultation.bacteriology",
"extensionPointId": "org.bahmni.clinical.consultation.board",
"type": "link",
"label": "Bacteriology",
"translationKey":"BACTERIOLOGY_BOARD_LABEL_KEY",
"url": "bacteriology",
"icon": "icon-user-md",
"order": 7
} |
| Info |
|---|
Please refer to the following link to know more about this configuration: https://github.com/Bhamni/default-config/blob/master/openmrs/apps/clinical/extension.json |
| Warning |
|---|
Please make sure to configure the value of urlto be "bacteriology" and extensionPointId to be "org.bahmni.clinical.consultation.board ". |
Define the Core Fields and Result Capturing Forms
Configure Bacteriology Concept Set in OpenMRS by performing the following steps:
Add core fields
These are the fields that help the page to be populated. All these fields be set members of concept set "BACTERIOLOGY CONCEPT SET".
| Note | ||
|---|---|---|
For Example, in the below screenshot, Specimen Collection Date,Specimen Sample Source and Specimen ID are the fields (concepts) added as members of concept set ("BACTERIOLOGY CONCEPT SET).
|
Add the Bacteriology Results forms
These forms are for capturing the test results for bacteriology.
| Tip |
|---|
To add a form, please follow the steps mentioned in create a new observation form. |
Sample CSVs (concepts and concept_sets) are given below.
| Note |
|---|
If any concept which is given in the below sample CSVs already exists, it will be updated with the given parameters for that concept in the CSV. |
View file name bacteriology_concepts_new.csv height 250 View file name bacteriology_concept_sets.csv height 250
Add Additional fields
In order to configure additional fields in this Bacteriology page, add those fields as members to Bacteriology Additional Attributes Concept Set
| Tip |
|---|
Use Openmrs UI, to add these fields (concepts) |
| Note | ||
|---|---|---|
| ||
In below screenshot, Laboratory Name is one of the Additional Field added |
Display Bacteriology Results
One can choose to view the Bacteriology results on a Dashboard Page in two ways :-
- Obs to Obs Flow Sheet
- Bacteriology results Display control
Obs to Obs Flow Sheet
| Info |
|---|
More about the control Display Controls#ObsToObsFlowSheet |
For example, add the configuration below in clinical/dashboard.json
| Code Block | ||||
|---|---|---|---|---|
| ||||
"Bacteriology Concept Set": {
"displayType": "Full-Page",
"translationKey": "DASHBOARD_TITLE_BACTERIOLOGY_RESULTS_KEY",
"name": "obsToObsFlowSheet",
"dashboardConfig": {
"numberOfVisits": 1,
"initialCount": 3,
"latestCount": 4,
"templateName": "BACTERIOLOGY CONCEPT SET",
"groupByConcept": "Specimen Collection Date",
"conceptNames": [
"Specimen Id"
]
},
"expandedViewConfig": {
"templateName": "BACTERIOLOGY CONCEPT SET",
"groupByConcept": "Specimen Collection Date"
}
} |
The Bacteriology results will be visible on the Patient Dashboard as shown in the screenshot below:
Bacteriology Results Display Control
| Info |
|---|
More about this control Display Controls#BacteriologyResultsControl |
For example, add the configuration below in clinical/dashboard.json
| Code Block | ||||
|---|---|---|---|---|
| ||||
"bacteriologyResults": {
"translationKey": "DASHBOARD_TITLE_BACTERIOLOGY_RESULTS_KEY",
"type": "bacteriologyResultsControl",
"scope": "All",
"orderType": "",
"dashboardConfig": {
"conceptNames": [
"BACTERIOLOGY CONCEPT SET"
]
}
} |
The Bacteriology results will be visible on the Patient Dashboard as shown in the screenshot below:
| Tip | ||||
|---|---|---|---|---|
| ||||
|
| Panel | ||||||
|---|---|---|---|---|---|---|
| ||||||