SNOMED Links and Reference Materials

This table contains the curated list of all references regarding the Bahmni SNOMED integration.

Summary

Reference Links

Summary

Reference Links

1

Github open source - Snowstorm. Terminology server with special support for SNOMED CT

https://github.com/IHTSDO/snowstorm

2

Snowstorm Test Server (released)

https://snowstorm.ihtsdotools.org/fhir/metadata

3

Snowstorm Dev Server for development use (new FHIR based)

https://dev-is-browser.ihtsdotools.org/fhir/metadata

4

Github open source - SNOMED Query Service. An implementation of the SNOMED CT Expression Constraint Language. Suggested for low-memory use

https://github.com/IHTSDO/snomed-query-service

5

SNOMED International Browser

https://browser.ihtsdotools.org/?acceptLicense=true

 

6

Snowstorm with FHIR

https://github.com/IHTSDO/snowstorm/blob/master/docs/using-the-fhir-api.md

7

ECL Query - Search for term asthma and its descendants

https://dev-is-browser.ihtsdotools.org/fhir/ValueSet/$expand?url=http://snomed.info/sct?fhir_vs=ecl/%3C64572001&filter=asthm

8

ECL Query - Search for terms with ancestors with FSN itself

https://dev-is-browser.ihtsdotools.org/fhir/ValueSet/$expand?url=http://snomed.info/sct?fhir_vs=ecl/%3E%3E195967001&includeDesignations=true

9

ECL Query - Get specific concept by ID

https://dev-is-browser.ihtsdotools.org/fhir/CodeSystem/$lookup?system=http://snomed.info/sct&code=12463005

10

How OpenMRS stores the mappings

username - admin

password - Admin123

https://demo.openmrs.org/openmrs/dictionary/concept.htm?conceptId=129473

11

SNOMED CT support for OpenMRS via FHIR - Michael Lawley (202111) - Explore this from OpenMRS (seems to create concepts in OpenMRS)

https://www.youtube.com/watch?v=Yx_vqt8jg7E

12

 

GitHub - aehrc/openmrs-module-terminologysearch: A module for OpenMRS to search a FHIR terminology server for concepts.

 

https://github.com/aehrc/openmrs-module-terminologysearch

13

The SNOMED CT Release File Specification - SNOMED Confluence

https://confluence.ihtsdotools.org/display/DOCRELFMT

14

SNOMED CT User Interface Examples

https://github.com/IHTSDO/snomed-ui-examples

15

SNOMED CT Search Demo

https://ihtsdo.github.io/snomed-ui-examples/

 

16

SNOMED Postman Collection
DEV Tools / Dev SNOMED server for testing 

https://github.com/IHTSDO/snowstorm-x/blob/master/docs/using-the-fhir-api.md

17

Tutorial: Introduction to SNOMED CT - Ian Spiers and Jon Zammit (202069)

https://www.youtube.com/watch?v=ELgXwo324pk

(Watch in 1.25x or 1.50x speed)

18

Best Practices for using SNOMED in EMRs/EHRs
Tutorial: SNOMED CT in the EHR - Anne Højen (202071)

https://www.youtube.com/watch?v=8VDf4slOAqo

(Watch in 1.25x or 1.50x speed)

19

Ontoserver Documentation

https://ontoserver.csiro.au/docs/6/

20

Shrimp - SNOMED CT Browser

http://ontoserver.csiro.au/shrimp/?concept=138875005&valueset=http%3A%2F%2Fsnomed.info%2Fsct%3Ffhir_vs

21

SNOMED CT - CDS Techical Example - Allergy to Beta Blocker

https://docs.google.com/document/d/1hKyuDTyzOJdyFR2lNZpGGQA-7NH6TmVaJSLfHQ1DiM4

22

Expression Constraint Language - Specification and Guide

http://snomed.org/ecl

23

Bahmni-SNOMED introductory session (16-Nov, By Akhil/Angshuman)
Passcode: ySH5!w!M

Video Conferencing, Web Conferencing, Webinars, Screen Sharing

 

24

SNOMED CT Query Service - An implementation of the SNOMED CT Expression Constraint Language for low resource environments

https://github.com/IHTSDO/snomed-query-service

25

Snolytical - SNOMED CT Health Data Analytics Demonstrator

https://github.com/IHTSDO/health-data-analytics

26

Enabling Data Analytics from 0 to 100 using Open Source 202272 Anne Hojen:Kai Kewley

https://www.youtube.com/watch?v=9aSp31dJ0_E

27

Demonstrates the mappings between SNOMED CT, ICD-10 etc

https://github.com/IHTSDO/iid-icd-maps

28

SNOMED CT - ICD Mappings Demonstrator

https://ihtsdo.github.io/iid-icd-maps/

29

HL7 FHIR

http://hl7.org/fhir/index.html

30

Implementation Guide for using SNOMED CT with FHIR

https://confluence.ihtsdotools.org/display/FHIR/Implementation+Guide+for+using+SNOMED+CT+with+FHIR

31

CDS Hooks Sandbox

https://sandbox.cds-hooks.org/

32

SNOMED CT Expo

https://issuu.com/snomed/docs/snomed_ct_expo_2023_program?fr=sZTk5OTQ2NTE4OTU

33

Discussions with Andrew Kanter

Bahmni PAT call on 17-May-2023 (SNOMED CT and Bahmni Integration)
SNOMED-CT as a source?

Bahmni PAT call on 12 July 2023

34

Guidelines for ATC Classification and DDD assignment

https://www.whocc.no/filearchive/publications/2023_guidelines_web.pdf

35

OpenMRS REST API

https://rest.openmrs.org/#openmrs-rest-api

36

SCT Implementation Demonstrator

GitHub - IHTSDO/sct-implementation-demonstrator

37

SNOMED CT Implementation Demo - AllergyIntolerance HL7 FHIR Resource

Implementation Demos

38

SNOMED CT Search Demo

SnomedSearchDemo

39

IHTSDO Glossary

https://www.nrces.in/download/files/pdf/doc_IhtsdoGlossary_Current-en-US_INT_20190312.pdf

40

Concept Dictionary Basics

https://wiki.openmrs.org/display/docs/Concept+Dictionary+Basics

41

Concept Data Model

https://wiki.openmrs.org/display/docs/Concept+Data+Model

42

OpenMRS Data Model

OpenMRS Data Models

43

Observable example(Alej)

SNOMED International Browser

44

Translation in Bahmni

Dev Notes for Translating Bahmni using Transifex

45

India SNOMED Drug Extension

https://www.nrces.in/services/national-releases

46

India Drug Extension for SNOMED CT

https://www.nrces.in/download/files/pdf/xdoc_SnomedCT-IN-BETA-ReleaseNotes_DrugExtension-en-IN_IN1000189_20180105.pdf

47

ABDM Drug Registry

https://abdm.gov.in:8081/uploads/Drug_Registry_Consultation_Paper_092e75a15e.pdf

48

OCL subscription module for OpenMRS

https://wiki.openmrs.org/display/docs/OCL+Subscription+Module

49

Various “collections” in OCL, with “CIEL"

https://app.openconceptlab.org/#/search/?q=CIEL&isTable=true&isList=false&page=1&exactMatch=off&type=collections

50

SNOMED Combinatorial Drug Example

http://snomed.info/id/776244001

51

Case report form for confirmed Novel Coronavirus COVID-19

https://www.who.int/publications/i/item/WHO-2019-nCoV-SurveillanceCRF-2022.1

52

Using Synthea to generate FHIR bulk export

https://github.com/synthetichealth/synthea/wiki/HL7-FHIR#configuring-fhir

53

FHIR Data Anonymization - Sample configuration file

https://github.com/microsoft/Tools-for-Health-Data-Anonymization/blob/master/docs/FHIR-anonymization.md#sample-configuration-file

54

Medication Request - HL7

http://hl7.org/fhir/R4/medicationrequest.html

55

Using EMR-enabled computerized decision support systems to reduce prescribing of potentially inappropriate medications

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6116772/

 

 

 

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